Tue Jul 23 00:09:51 CEST 2013 ============== action: acquisition ======================= real 0m0.008s user 0m0.002s sys 0m0.004s === acquisition done === Time: .0151s Tue Jul 23 00:09:51 CEST 2013 ============== action: analysis ======================= Performing advanced discharge analysis I 0.000751881 B 0.367181 P 5.41149 n 0.0400358 R 0.4 Aspect 0.25 confinent time = 0.369118372371 real 0m1.682s user 0m1.462s sys 0m0.197s === analysis done === Time: 1.686s Tue Jul 23 00:09:54 CEST 2013 !!! ============== action: postanalysis ======================= LOCAL_PATH /srv/www/svoboda/golem/operation/tasks/TrainingCourses/0613TV/170613_1247/192530/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis tee: /home/svoboda/GOLEM/web/roperation/RemoteTokamak/actions.log: No such file or directory main.py:161: RuntimeWarning: divide by zero encountered in divide ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:161: RuntimeWarning: invalid value encountered in multiply ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:162: RuntimeWarning: divide by zero encountered in divide ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) main.py:162: RuntimeWarning: invalid value encountered in multiply ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) /usr/lib64/python2.7/site-packages/pygolem_lite/modules.py:326: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... main.py:244: RuntimeWarning: divide by zero encountered in divide get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [], main.py:245: RuntimeWarning: divide by zero encountered in divide get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] , ======= mean(isnan(corr)) 0.0311292637156 saving 1.1855430603 plotting time 1.19s Some mistake during get_data: Missing file: /srv/www/svoboda/golem/shots/12513/analysis/Radiation/1212Impurities_TO.ON/data//temperature saving 0.544924020767 plotting time 0.54s Some mistake during get_data: Missing file: /srv/www/svoboda/golem/shots/12513/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower saving 1.64984107018 plotting time 1.65s saving 1.58839893341 plotting time 1.59s ===== plotting done ===== saving 0.750439882278 plotting time 0.75s Traceback (most recent call last): File "main.py", line 282, in main() File "main.py", line 278, in main saveconst('status', 0) File "/usr/lib64/python2.7/site-packages/pygolem_lite/utilities.py", line 49, in saveconst with open(fname, 'w') as fhandle: IOError: [Errno 13] Permission denied: 'status' real 0m12.240s user 0m0.049s sys 0m0.014s === postanalysis === Time: 12.28s TueLOCAL_PATH /srv/www/svoboda/golem/operation/tasks/TrainingCourses/0613TV/170613_1247/192530/analysis/Basics/0612AdvancedAnalysis.ON main.py:161: RuntimeWarning: divide by zero encountered in divide ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:161: RuntimeWarning: invalid value encountered in multiply ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:162: RuntimeWarning: divide by zero encountered in divide ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) main.py:162: RuntimeWarning: invalid value encountered in multiply ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) /usr/lib64/python2.7/site-packages/pygolem_lite/modules.py:326: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... main.py:244: RuntimeWarning: divide by zero encountered in divide get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [], main.py:245: RuntimeWarning: divide by zero encountered in divide get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] , ======= mean(isnan(corr)) 0.0311292637156 saving 1.64333581924 plotting time 1.64s Some mistake during get_data: Missing file: /srv/www/svoboda/golem/shots/12513/analysis/Radiation/1212Impurities_TO.ON/data//temperature saving 0.646142959595 plotting time 0.65s Some mistake during get_data: Missing file: /srv/www/svoboda/golem/shots/12513/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower saving 1.15642595291 plotting time 1.16s saving 1.04957103729 plotting time 1.05s ===== plotting done ===== saving 0.54944396019 plotting time 0.55s Traceback (most recent call last): File "main.py", line 282, in main() File "main.py", line 274, in main saveconst('status', 0) File "/usr/lib64/python2.7/site-packages/pygolem_lite/utilities.py", line 49, in saveconst with open(fname, 'w') as fhandle: IOError: [Errno 13] Permission denied: 'status' real 0m10.871s user 0m0.036s sys 0m0.011s Tue Jul 23 00:11:19 CEST 2013 ============== action: clean ======================= make: *** No rule to make target `clean'. Stop. make: Entering directory `/srv/www/svoboda/golem/operation/tasks/TrainingCourses/0613TV/170613_1247/192530/analysis/Basics/0612AdvancedAnalysis.ON' make: *** No rule to make target `clean'. Stop. make: Leaving directory `/srv/www/svoboda/golem/operation/tasks/TrainingCourses/0613TV/170613_1247/192530/analysis/Basics/0612AdvancedAnalysis.ON' === plots === Time: 10.89s