Mon Jul 22 23:08:28 CEST 2013 ============== action: acquisition ======================= real 0m0.012s user 0m0.001s sys 0m0.005s === acquisition done === Time: .0324s Mon Jul 22 23:08:28 CEST 2013 ============== action: analysis ======================= Performing advanced discharge analysis I 0.00213913 B 0.12685 P 18.8714 n 0.145168 R 0.4 Aspect 0.25 confinent time = 0.596040916356 real 0m2.249s user 0m1.769s sys 0m0.269s === analysis done === Time: 2.253s Mon Jul 22 23:08:31 CEST 2013 !!! ============== action: postanalysis ======================= LOCAL_PATH /srv/www/svoboda/golem/operation/tasks/Practica/PraktikaFyzikyPlazmatu/2012/MatenaJeskoHXR/200613_1601/205125/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis tee: /home/svoboda/GOLEM/web/roperation/RemoteTokamak/actions.log: No such file or directory main.py:161: RuntimeWarning: divide by zero encountered in divide ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:161: RuntimeWarning: invalid value encountered in multiply ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:162: RuntimeWarning: divide by zero encountered in divide ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) main.py:162: RuntimeWarning: invalid value encountered in multiply ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) /usr/lib64/python2.7/site-packages/pygolem_lite/modules.py:326: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... main.py:244: RuntimeWarning: divide by zero encountered in divide get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [], main.py:245: RuntimeWarning: divide by zero encountered in divide get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] , ======= mean(isnan(corr)) 0.11162202552 saving 1.42729282379 plotting time 1.43s saving 1.53135299683 plotting time 1.53s saving 0.923810005188 plotting time 0.92s saving 1.13900995255 plotting time 1.14s ===== plotting done ===== saving 0.56355714798 plotting time 0.56s Traceback (most recent call last): File "main.py", line 282, in main() File "main.py", line 278, in main saveconst('status', 0) File "/usr/lib64/python2.7/site-packages/pygolem_lite/utilities.py", line 49, in saveconst with open(fname, 'w') as fhandle: IOError: [Errno 13] Permission denied: 'status' real 0m10.952s user 0m0.047s sys 0m0.011s === postanalysis === Time: 10.96s MonLOCAL_PATH /srv/www/svoboda/golem/operation/tasks/Practica/PraktikaFyzikyPlazmatu/2012/MatenaJeskoHXR/200613_1601/205125/analysis/Basics/0612AdvancedAnalysis.ON main.py:161: RuntimeWarning: divide by zero encountered in divide ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:161: RuntimeWarning: invalid value encountered in multiply ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:162: RuntimeWarning: divide by zero encountered in divide ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) main.py:162: RuntimeWarning: invalid value encountered in multiply ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) /usr/lib64/python2.7/site-packages/pygolem_lite/modules.py:326: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... main.py:244: RuntimeWarning: divide by zero encountered in divide get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [], main.py:245: RuntimeWarning: divide by zero encountered in divide get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] , ======= mean(isnan(corr)) 0.11162202552 saving 1.52932906151 plotting time 1.53s saving 1.32792186737 plotting time 1.33s saving 1.49192905426 plotting time 1.49s saving 1.33360791206 plotting time 1.33s ===== plotting done ===== saving 0.808800935745 plotting time 0.81s Traceback (most recent call last): File "main.py", line 282, in main() File "main.py", line 274, in main saveconst('status', 0) File "/usr/lib64/python2.7/site-packages/pygolem_lite/utilities.py", line 49, in saveconst with open(fname, 'w') as fhandle: IOError: [Errno 13] Permission denied: 'status' real 0m11.758s user 0m0.042s sys 0m0.010s Mon Jul 22 23:09:56 CEST 2013 ============== action: clean ======================= make: *** No rule to make target `clean'. Stop. make: Entering directory `/srv/www/svoboda/golem/operation/tasks/Practica/PraktikaFyzikyPlazmatu/2012/MatenaJeskoHXR/200613_1601/205125/analysis/Basics/0612AdvancedAnalysis.ON' make: *** No rule to make target `clean'. Stop. make: Leaving directory `/srv/www/svoboda/golem/operation/tasks/Practica/PraktikaFyzikyPlazmatu/2012/MatenaJeskoHXR/200613_1601/205125/analysis/Basics/0612AdvancedAnalysis.ON' === plots === Time: 11.78s