Mon Jul 22 23:07:18 CEST 2013 ============== action: acquisition ======================= real 0m0.009s user 0m0.002s sys 0m0.004s === acquisition done === Time: .0128s Mon Jul 22 23:07:18 CEST 2013 ============== action: analysis ======================= Performing advanced discharge analysis I 0.00219976 B 0.128073 P 19.2734 n 0.23567 R 0.4 Aspect 0.25 confinent time = 0.736462916074 real 0m1.219s user 0m1.046s sys 0m0.159s === analysis done === Time: 1.222s Mon Jul 22 23:07:20 CEST 2013 !!! ============== action: postanalysis ======================= LOCAL_PATH /srv/www/svoboda/golem/operation/tasks/Practica/PraktikaFyzikyPlazmatu/2012/MatenaJeskoHXR/200613_1601/205811/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis tee: /home/svoboda/GOLEM/web/roperation/RemoteTokamak/actions.log: No such file or directory main.py:161: RuntimeWarning: divide by zero encountered in divide ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:161: RuntimeWarning: invalid value encountered in multiply ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:162: RuntimeWarning: divide by zero encountered in divide ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) main.py:162: RuntimeWarning: invalid value encountered in multiply ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) /usr/lib64/python2.7/site-packages/pygolem_lite/modules.py:326: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... main.py:244: RuntimeWarning: divide by zero encountered in divide get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [], main.py:245: RuntimeWarning: divide by zero encountered in divide get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] , ======= mean(isnan(corr)) 0.0993340106107 saving 1.30331897736 plotting time 1.30s saving 0.920911073685 plotting time 0.92s saving 1.2934179306 plotting time 1.29s saving 1.92101502419 plotting time 1.92s ===== plotting done ===== saving 1.03197407722 plotting time 1.03s Traceback (most recent call last): File "main.py", line 282, in main() File "main.py", line 278, in main saveconst('status', 0) File "/usr/lib64/python2.7/site-packages/pygolem_lite/utilities.py", line 49, in saveconst with open(fname, 'w') as fhandle: IOError: [Errno 13] Permission denied: 'status' real 0m12.504s user 0m0.047s sys 0m0.013s === postanalysis === Time: 12.51s MonLOCAL_PATH /srv/www/svoboda/golem/operation/tasks/Practica/PraktikaFyzikyPlazmatu/2012/MatenaJeskoHXR/200613_1601/205811/analysis/Basics/0612AdvancedAnalysis.ON main.py:161: RuntimeWarning: divide by zero encountered in divide ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:161: RuntimeWarning: invalid value encountered in multiply ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:162: RuntimeWarning: divide by zero encountered in divide ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) main.py:162: RuntimeWarning: invalid value encountered in multiply ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) /usr/lib64/python2.7/site-packages/pygolem_lite/modules.py:326: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... main.py:244: RuntimeWarning: divide by zero encountered in divide get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [], main.py:245: RuntimeWarning: divide by zero encountered in divide get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] , ======= mean(isnan(corr)) 0.0993340106107 saving 1.3556740284 plotting time 1.36s saving 1.09213089943 plotting time 1.09s saving 1.50037288666 plotting time 1.50s saving 2.05012512207 plotting time 2.05s ===== plotting done ===== saving 1.21417999268 plotting time 1.21s Traceback (most recent call last): File "main.py", line 282, in main() File "main.py", line 274, in main saveconst('status', 0) File "/usr/lib64/python2.7/site-packages/pygolem_lite/utilities.py", line 49, in saveconst with open(fname, 'w') as fhandle: IOError: [Errno 13] Permission denied: 'status' real 0m16.098s user 0m0.039s sys 0m0.014s Mon Jul 22 23:08:36 CEST 2013 ============== action: clean ======================= make: *** No rule to make target `clean'. Stop. make: Entering directory `/srv/www/svoboda/golem/operation/tasks/Practica/PraktikaFyzikyPlazmatu/2012/MatenaJeskoHXR/200613_1601/205811/analysis/Basics/0612AdvancedAnalysis.ON' make: *** No rule to make target `clean'. Stop. make: Leaving directory `/srv/www/svoboda/golem/operation/tasks/Practica/PraktikaFyzikyPlazmatu/2012/MatenaJeskoHXR/200613_1601/205811/analysis/Basics/0612AdvancedAnalysis.ON' === plots === Time: 16.11s