Wed Aug 28 12:33:21 CEST 2013
============== action: acquisition =======================
Wed
real	0m0.002s
user	0m0.000s
sys	0m0.001s
=== acquisition done === Time: .0026s
Wed Aug 28 12:33:21 CEST 2013
============== action: analysis =======================
Performing advanced discharge analysis
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
 confinent time failed  Loading of constant failed: /golem/database/operation/shots/12778/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean
 error: [Errno 2] No such file or directory: '/golem/database/operation/shots/12778/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean'

real	0m0.522s
user	0m0.490s
sys	0m0.027s
=== analysis done === Time: .5230s
Wed Aug 28 12:33:21 CEST 2013
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1200/123102/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
correction on plasma position failed Missing file: /golem/database/operation/shots/12778/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12778/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
Safety factor failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12778/analysis/Radiation/1212Impurities_TO.ON/data//temperature
Electron temperature failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12778/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 1.02936601639
plotting time 1.03s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  8.05,  31.83]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.00000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - total'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ 0.        ,  0.        ,  0.        , ..., -1.0320365 ,
       -1.01689569, -1.02795313]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - magnetic'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ -8.38699918e-10,   1.13012630e-11,  -9.98534588e-11, ...,
        -7.55708847e-02,   7.60796082e-01,   3.70243945e+00]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - plasma'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ 0.        , -0.        ,  0.        , ...,  0.6693941 ,
        0.29639008, -1.08644482]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - chamber'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([  2.83886806e-10,  -1.13012630e-11,   9.98534588e-11, ...,
        -1.62436157e+00,  -2.09341968e+00,  -3.64394775e+00]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([-0.03494011, -0.03470844, -0.03419957, ..., -0.21685871,
       -0.2181289 , -0.21866031]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  8.05,  31.83]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': array([0, 0]), 'ylim': [None, None]}]]
Icon failed setting an array element with a sequence.

real	0m1.644s
user	0m1.515s
sys	0m0.105s
Wed Aug 28 12:33:22 CEST 2013 ============== action: clean =======================
make: *** No rule to make target `clean'.  Stop.
make: Entering directory `/golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1200/123102/analysis/Basics/0612AdvancedAnalysis.ON'
make: *** No rule to make target `clean'.  Stop.
make: Leaving directory `/golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1200/123102/analysis/Basics/0612AdvancedAnalysis.ON'
=== plots === Time: 1.649s
correction on plasma position failed Missing file: /golem/database/operation/shots/12778/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12778/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
Safety factor failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12778/analysis/Radiation/1212Impurities_TO.ON/data//temperature
Electron temperature failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12778/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.687762975693
plotting time 0.69s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  8.05,  31.83]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - total'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ 0.        ,  0.        ,  0.        , ..., -1.04730481,
       -1.01689569, -1.02795313]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - magnetic'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ -8.38699918e-10,   4.72892168e-10,  -1.92197064e-10, ...,
        -7.55708847e-02,   4.16181908e-02,   3.70243945e+00]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - plasma'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([ 0.        , -0.        ,  0.        , ...,  0.71601208,
        0.6239939 , -1.08644482]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - chamber'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([  2.83886806e-10,  -4.72892168e-10,   9.98534588e-11, ...,
        -1.62585962e+00,  -2.09341968e+00,  -3.64394775e+00]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': Data([-0.03494011, -0.03470844, -0.03421124, ..., -0.21685871,
       -0.21775585, -0.21866031]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([  8.05,  31.83]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  8.05,  31.83]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 8.0500000000000007, 'xend': 31.829999999999998, 'data': array([0, 0]), 'ylim': [None, None]}]]
Icon failed setting an array element with a sequence.

real	0m1.449s
user	0m1.327s
sys	0m0.108s
=== postanalysis === Time: 1.450s