Wed Aug 28 12:52:19 CEST 2013
============== action: acquisition =======================
Wed
real	0m0.001s
user	0m0.000s
sys	0m0.001s
=== acquisition done === Time: .0019s
Wed Aug 28 12:52:19 CEST 2013
============== action: analysis =======================
Performing advanced discharge analysis
/usr/lib64/python2.7/site-packages/numpy/core/fromnumeric.py:2374: RuntimeWarning: invalid value encountered in divide
  return mean(axis, dtype, out)
 confinent time failed  Loading of constant failed: /golem/database/operation/shots/12783/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean
 error: [Errno 2] No such file or directory: '/golem/database/operation/shots/12783/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean'

real	0m0.397s
user	0m0.355s
sys	0m0.038s
=== analysis done === Time: .3981s
Wed Aug 28 12:52:20 CEST 2013
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1200/125001/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
/usr/lib64/python2.7/site-packages/numpy/core/fromnumeric.py:2374: RuntimeWarning: invalid value encountered in divide
  return mean(axis, dtype, out)
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
correction on plasma position failed Missing file: /golem/database/operation/shots/12783/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12783/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
Safety factor failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12783/analysis/Radiation/1212Impurities_TO.ON/data//temperature
Electron temperature failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12783/basicdiagn/PowerTotal
Some mistake during get_data: Missing file: /golem/database/operation/shots/12783/basicdiagn/PowerMagnetic
Some mistake during get_data: Missing file: /golem/database/operation/shots/12783/basicdiagn/PowerPlasma
Some mistake during get_data: Missing file: /golem/database/operation/shots/12783/basicdiagn/PowerChamber
Some mistake during get_data: Missing file: /golem/database/operation/shots/12783/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.593430042267
plotting time 0.59s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  7.97,  39.39]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [None, None, None, None, {'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': Data([-0.29270793, -0.29202883, -0.28919452, ..., -0.49615368,
       -0.50504878, -0.50852152]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  7.97,  39.39]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': array([0, 0]), 'ylim': [None, None]}]]
Icon failed setting an array element with a sequence.

real	0m1.185s
user	0m1.078s
sys	0m0.093s
Wed Aug 28 12:52:20 CEST 2013 ============== action: clean =======================
make: *** No rule to make target `clean'.  Stop.
make: Entering directory `/golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1200/125001/analysis/Basics/0612AdvancedAnalysis.ON'
make: *** No rule to make target `clean'.  Stop.
make: Leaving directory `/golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1200/125001/analysis/Basics/0612AdvancedAnalysis.ON'
=== plots === Time: 1.189s
correction on plasma position failed Missing file: /golem/database/operation/shots/12783/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12783/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
Safety factor failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12783/analysis/Radiation/1212Impurities_TO.ON/data//temperature
Electron temperature failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12783/basicdiagn/PowerTotal
Some mistake during get_data: Missing file: /golem/database/operation/shots/12783/basicdiagn/PowerMagnetic
Some mistake during get_data: Missing file: /golem/database/operation/shots/12783/basicdiagn/PowerPlasma
Some mistake during get_data: Missing file: /golem/database/operation/shots/12783/basicdiagn/PowerChamber
Some mistake during get_data: Missing file: /golem/database/operation/shots/12783/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.536787033081
plotting time 0.54s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  7.97,  39.39]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [None, None, None, None, {'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': Data([-0.29270793, -0.29202883, -0.28919452, ..., -0.49838288,
       -0.50504878, -0.50852152]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([  7.97,  39.39]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  7.97,  39.39]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 7.9699999999999998, 'xend': 39.390000000000001, 'data': array([0, 0]), 'ylim': [None, None]}]]
Icon failed setting an array element with a sequence.

real	0m1.325s
user	0m1.191s
sys	0m0.090s
=== postanalysis === Time: 1.326s