Wed Aug 28 13:52:45 CEST 2013
============== action: acquisition =======================
Wed
real	0m0.001s
user	0m0.001s
sys	0m0.000s
=== acquisition done === Time: .0022s
Wed Aug 28 13:52:45 CEST 2013
============== action: analysis =======================
Performing advanced discharge analysis
 confinent time failed  Loading of constant failed: /golem/database/operation/shots/12790/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean
 error: [Errno 2] No such file or directory: '/golem/database/operation/shots/12790/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean'

real	0m0.407s
user	0m0.371s
sys	0m0.030s
=== analysis done === Time: .4073s
Wed Aug 28 13:52:45 CEST 2013
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1200/135024/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
correction on plasma position failed Missing file: /golem/database/operation/shots/12790/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12790/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
Safety factor failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12790/analysis/Radiation/1212Impurities_TO.ON/data//temperature
Electron temperature failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12790/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.780928134918
plotting time 0.78s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  8.01,  10.71]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - total'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ 0.        ,  0.        ,  0.        , ..., -1.01276324,
       -1.00656781, -1.04316687]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - magnetic'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ -5.17014030e-10,  -1.09123825e-10,   5.47315970e-11, ...,
        -2.37344818e-02,  -1.58284729e-01,  -2.40606055e+00]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - plasma'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([  0.        ,   0.        ,  -0.        , ...,  11.3742041 ,
        11.93125195,  13.86635449]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - chamber'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([  5.17014030e-10,   1.09123825e-10,  -5.47315970e-11, ...,
        -1.24090488e+01,  -1.25488564e+01,  -1.25034609e+01]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([-0.29145118, -0.29026341, -0.28595254, ..., -0.47692057,
       -0.48039688, -0.48217591]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  8.01,  10.71]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': array([0, 0]), 'ylim': [None, None]}]]
Icon failed setting an array element with a sequence.

real	0m1.464s
user	0m1.349s
sys	0m0.091s
Wed Aug 28 13:52:46 CEST 2013 ============== action: clean =======================
make: *** No rule to make target `clean'.  Stop.
make: Entering directory `/golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1200/135024/analysis/Basics/0612AdvancedAnalysis.ON'
make: *** No rule to make target `clean'.  Stop.
make: Leaving directory `/golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1200/135024/analysis/Basics/0612AdvancedAnalysis.ON'
=== plots === Time: 1.468s
correction on plasma position failed Missing file: /golem/database/operation/shots/12790/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12790/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
Safety factor failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12790/analysis/Radiation/1212Impurities_TO.ON/data//temperature
Electron temperature failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12790/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.622023105621
plotting time 0.62s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  8.01,  10.71]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - total'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ 0.        ,  0.        ,  0.        , ..., -1.01276324,
       -1.02553638, -1.04316687]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - magnetic'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([ -5.17014030e-10,  -1.09123825e-10,   5.47315970e-11, ...,
        -2.37344818e-02,  -1.58284729e-01,  -2.40606055e+00]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - plasma'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([  0.        ,   0.        ,  -0.        , ...,  11.38906738,
        11.68160547,  13.86635449]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - chamber'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([  5.17014030e-10,   1.09123825e-10,  -1.04202201e-10, ...,
        -1.24090488e+01,  -1.22644395e+01,  -1.25034609e+01]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': Data([-0.29099101, -0.28931871, -0.28595254, ..., -0.47564467,
       -0.48039688, -0.48217591]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([  8.01,  10.71]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  8.01,  10.71]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 8.0099999999999998, 'xend': 10.710000000000001, 'data': array([0, 0]), 'ylim': [None, None]}]]
Icon failed setting an array element with a sequence.

real	0m1.256s
user	0m1.161s
sys	0m0.091s
=== postanalysis === Time: 1.257s