Wed Aug 28 14:02:54 CEST 2013
============== action: acquisition =======================
Wed
real	0m0.002s
user	0m0.001s
sys	0m0.000s
=== acquisition done === Time: .0037s
Wed Aug 28 14:02:54 CEST 2013
============== action: analysis =======================
Performing advanced discharge analysis
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
 confinent time failed  Loading of constant failed: /golem/database/operation/shots/12791/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean
 error: [Errno 2] No such file or directory: '/golem/database/operation/shots/12791/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean'

real	0m0.612s
user	0m0.568s
sys	0m0.038s
=== analysis done === Time: .6124s
Wed Aug 28 14:02:55 CEST 2013
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1200/135937/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
correction on plasma position failed Missing file: /golem/database/operation/shots/12791/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12791/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
Safety factor failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12791/analysis/Radiation/1212Impurities_TO.ON/data//temperature
Electron temperature failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12791/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.932435035706
plotting time 0.93s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  7.05,  31.95]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - total'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ 0.        ,  0.        ,  0.        , ...,  0.95624603,
        1.16090125,  1.04317737]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.00000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - magnetic'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ -2.03394478e-10,  -1.22576189e-11,  -5.87618558e-10, ...,
        -2.72798267e+00,   6.23030334e-01,   7.84322344e+01]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - plasma'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([  0.        ,  -0.        ,   0.        , ...,   1.79332263,
        -1.22578235, -69.98608594]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - chamber'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([  1.93018934e-10,  -4.19965772e-10,   3.88977185e-10, ...,
         2.05520972e+00,  -2.12214905e-01,  -7.40297461e+00]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([-0.03333727, -0.0332948 , -0.03316233, ..., -0.11749294,
       -0.10966816, -0.1067858 ]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  7.05,  31.95]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': array([0, 0]), 'ylim': [None, None]}]]
Icon failed setting an array element with a sequence.

real	0m1.563s
user	0m1.483s
sys	0m0.105s
Wed Aug 28 14:02:56 CEST 2013 ============== action: clean =======================
make: *** No rule to make target `clean'.  Stop.
make: Entering directory `/golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1200/135937/analysis/Basics/0612AdvancedAnalysis.ON'
make: *** No rule to make target `clean'.  Stop.
make: Leaving directory `/golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1200/135937/analysis/Basics/0612AdvancedAnalysis.ON'
=== plots === Time: 1.567s
correction on plasma position failed Missing file: /golem/database/operation/shots/12791/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12791/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
Safety factor failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12791/analysis/Radiation/1212Impurities_TO.ON/data//temperature
Electron temperature failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12791/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.751292943954
plotting time 0.75s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  7.05,  31.95]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - total'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ 0.        ,  0.        ,  0.        , ...,  0.95624603,
        1.16090125,  1.04317737]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - magnetic'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([ -1.93018934e-10,  -1.22576189e-11,  -5.87618558e-10, ...,
        -3.86726709e+00,   6.23030334e-01,   7.84322344e+01]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - plasma'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([  0.        ,  -0.        ,   0.        , ...,   2.93978613,
       -14.91614063, -69.98608594]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - chamber'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([  1.93018934e-10,  -4.19965772e-10,   5.87618558e-10, ...,
         1.88372705e+00,  -2.12214905e-01,  -7.40297461e+00]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': Data([-0.0333638 , -0.0332948 , -0.03316233, ..., -0.11749294,
       -0.11148769, -0.1067858 ]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([  7.05,  31.95]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  7.05,  31.95]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 7.0499999999999998, 'xend': 31.949999999999999, 'data': array([0, 0]), 'ylim': [None, None]}]]
Icon failed setting an array element with a sequence.

real	0m1.568s
user	0m1.423s
sys	0m0.117s
=== postanalysis === Time: 1.569s