Wed Aug 28 16:29:22 CEST 2013
============== action: acquisition =======================
Wed
real	0m0.002s
user	0m0.000s
sys	0m0.001s
=== acquisition done === Time: .0023s
Wed Aug 28 16:29:22 CEST 2013
============== action: analysis =======================
Performing advanced discharge analysis
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
 confinent time failed  Loading of constant failed: /golem/database/operation/shots/12815/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean
 error: [Errno 2] No such file or directory: '/golem/database/operation/shots/12815/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean'

real	0m0.595s
user	0m0.547s
sys	0m0.042s
=== analysis done === Time: .5955s
Wed Aug 28 16:29:23 CEST 2013
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1512/162618/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
correction on plasma position failed Missing file: /golem/database/operation/shots/12815/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12815/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
Safety factor failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12815/analysis/Radiation/1212Impurities_TO.ON/data//temperature
Electron temperature failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12815/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.728323936462
plotting time 0.73s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  8.81,  19.67]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - total'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ 0.        ,  0.        ,  0.        , ...,  0.78208215,
        0.52543518,  0.57341791]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - magnetic'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ -7.86922499e-10,   2.32959309e-10,  -1.11798144e-10, ...,
         6.64834717e-01,  -2.90495117e-01,  -1.09841680e+01]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - plasma'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([  0.        ,  -0.        ,   0.        , ...,  -1.06020984,
         2.08762109,  10.1612666 ]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - chamber'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([  6.06670483e-10,  -2.32959309e-10,   3.84693294e-10, ...,
         1.19959119e+00,   9.35102966e-01,   1.39631934e+00]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([-0.33549978, -0.33613904, -0.33891398, ..., -0.39833467,
       -0.39434871, -0.39236717]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  8.81,  19.67]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': array([0, 0]), 'ylim': [None, None]}]]
Icon failed setting an array element with a sequence.

real	0m1.322s
user	0m1.216s
sys	0m0.086s
Wed Aug 28 16:29:24 CEST 2013 ============== action: clean =======================
make: *** No rule to make target `clean'.  Stop.
make: Entering directory `/golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1512/162618/analysis/Basics/0612AdvancedAnalysis.ON'
make: *** No rule to make target `clean'.  Stop.
make: Leaving directory `/golem/database/operation/tasks/TrainingCourses/SUMTRAIC/13/280813_1512/162618/analysis/Basics/0612AdvancedAnalysis.ON'
=== plots === Time: 1.327s
correction on plasma position failed Missing file: /golem/database/operation/shots/12815/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12815/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
Safety factor failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12815/analysis/Radiation/1212Impurities_TO.ON/data//temperature
Electron temperature failed setting an array element with a sequence.
Some mistake during get_data: Missing file: /golem/database/operation/shots/12815/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.980447053909
plotting time 0.98s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  8.81,  19.67]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [{'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - total'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ 0.        ,  0.        ,  0.        , ...,  0.63559686,
        0.34542114,  0.57341791]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - magnetic'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([ -7.86922499e-10,   5.28153180e-10,  -1.11798144e-10, ...,
         6.64834717e-01,  -2.90495117e-01,  -1.09841680e+01]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - plasma'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([  0.        ,  -0.        ,   0.        , ...,  -1.06020984,
         0.08085275,  10.1612666 ]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - chamber'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([  7.86922499e-10,  -2.32959309e-10,   3.84693294e-10, ...,
         1.19959119e+00,   9.35102966e-01,   1.39631934e+00]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': Data([-0.33549978, -0.33685165, -0.33826268, ..., -0.39833467,
       -0.39561952, -0.39236717]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([  8.81,  19.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  8.81,  19.67]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 8.8100000000000005, 'xend': 19.670000000000002, 'data': array([0, 0]), 'ylim': [None, None]}]]
Icon failed setting an array element with a sequence.

real	0m1.702s
user	0m1.575s
sys	0m0.112s
=== postanalysis === Time: 1.703s