Thu Sep 12 16:56:56 CEST 2013
============== action: acquisition =======================
Thu
real	0m0.002s
user	0m0.000s
sys	0m0.001s
=== acquisition done === Time: .0043s
Thu Sep 12 16:56:56 CEST 2013
============== action: analysis =======================
Performing advanced discharge analysis
 confinent time failed  Loading of constant failed: /golem/database/operation/shots/12827/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean
 error: [Errno 2] No such file or directory: '/golem/database/operation/shots/12827/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean'

real	0m0.398s
user	0m0.363s
sys	0m0.029s
=== analysis done === Time: .3984s
Thu Sep 12 16:56:57 CEST 2013
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/SessionPreparation/2013/120913_1426/165455/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
/usr/lib64/python2.7/site-packages/numpy/core/_methods.py:55: RuntimeWarning: invalid value encountered in true_divide
  out=ret, casting='unsafe', subok=False)
/usr/lib64/python2.7/site-packages/numpy/core/_methods.py:55: RuntimeWarning: invalid value encountered in true_divide
  out=ret, casting='unsafe', subok=False)
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
correction on plasma position failed Missing file: /golem/database/operation/shots/12827/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12827/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
saving 0.922515869141
plotting time 0.92s
Some mistake during get_data: Missing file: /golem/database/operation/shots/12827/analysis/Radiation/1212Impurities_TO.ON/data//temperature
saving 0.402074098587
plotting time 0.40s
Some mistake during get_data: Missing file: /golem/database/operation/shots/12827/basicdiagn/PowerTotal
Some mistake during get_data: Missing file: /golem/database/operation/shots/12827/basicdiagn/PowerMagnetic
Some mistake during get_data: Missing file: /golem/database/operation/shots/12827/basicdiagn/PowerPlasma
Some mistake during get_data: Missing file: /golem/database/operation/shots/12827/basicdiagn/PowerChamber
Some mistake during get_data: Missing file: /golem/database/operation/shots/12827/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.432350873947
plotting time 0.43s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 7.3300000000000001, 'xend': 39.669999999999995, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 7.3300000000000001, 'xend': 39.669999999999995, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 7.3300000000000001, 'xend': 39.669999999999995, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 7.3300000000000001, 'xend': 39.669999999999995, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  7.33,  39.67]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 7.3300000000000001, 'xend': 39.669999999999995, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 7.33, 'xend': 39.669999999999995, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,correction on plasma position failed Missing file: /golem/database/operation/shots/12827/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12827/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
saving 0.798032999039
plotting time 0.80s
Some mistake during get_data: Missing file: /golem/database/operation/shots/12827/analysis/Radiation/1212Impurities_TO.ON/data//temperature
saving 0.333815813065
plotting time 0.33s
Some mistake during get_data: Missing file: /golem/database/operation/shots/12827/basicdiagn/PowerTotal
Some mistake during get_data: Missing file: /golem/database/operation/shots/12827/basicdiagn/PowerMagnetic
Some mistake during get_data: Missing file: /golem/database/operation/shots/12827/basicdiagn/PowerPlasma
Some mistake during get_data: Missing file: /golem/database/operation/shots/12827/basicdiagn/PowerChamber
Some mistake during get_data: Missing file: /golem/database/operation/shots/12827/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.393218994141
plotting time 0.39s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 7.3300000000000001, 'xend': 39.669999999999995, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 7.3300000000000001, 'xend': 39.669999999999995, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 7.3300000000000001, 'xend': 39.669999999999995, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 7.3300000000000001, 'xend': 39.669999999999995, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  7.33,  39.67]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 7.3300000000000001, 'xend': 39.669999999999995, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 7.33, 'xend': 39.669999999999995, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [None, None, None, None, {'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 7.33, 'xend': 39.669999999999995, 'data': Data([-0.02407775, -0.02643634, -0.02892009, ..., -0.23646   ,
       -0.23331959, -0.23086606]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  7.33,  39.67]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 7.33, 'xend': 39.669999999999995, 'data': array([0, 0]), 'ylim': [None, None]}]]
saving 0.792461872101
plotting time 0.79s

real	0m3.788s
user	0m3.641s
sys	0m0.181s
Thu Sep 12 16:57:00 CEST 2013 ============== action: clean =======================
make: *** No rule to make target `clean'.  Stop.
make: Entering directory `/golem/database/operation/tasks/SessionPreparation/2013/120913_1426/165455/analysis/Basics/0612AdvancedAnalysis.ON'
make: *** No rule to make target `clean'.  Stop.
make: Leaving directory `/golem/database/operation/tasks/SessionPreparation/2013/120913_1426/165455/analysis/Basics/0612AdvancedAnalysis.ON'
=== plots === Time: 3.792s
  nan]), 'ylim': [0, None]}, [], None], [None, None, None, None, {'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 7.33, 'xend': 39.669999999999995, 'data': Data([-0.02407775, -0.02643634, -0.0302029 , ..., -0.23646   ,
       -0.23331959, -0.23086606]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([  7.33,  39.67]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  7.33,  39.67]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 7.33, 'xend': 39.669999999999995, 'data': array([0, 0]), 'ylim': [None, None]}]]
saving 0.645021915436
plotting time 0.65s

real	0m3.409s
user	0m3.360s
sys	0m0.155s
=== postanalysis === Time: 3.410s