Thu Sep 12 17:08:21 CEST 2013
============== action: acquisition =======================

real	0m0.001s
user	0m0.001s
sys	0m0.000s
Thu=== acquisition done === Time: .0018s
Thu Sep 12 17:08:21 CEST 2013
============== action: analysis =======================
Performing advanced discharge analysis
 confinent time failed  Loading of constant failed: /golem/database/operation/shots/12829/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean
 error: [Errno 2] No such file or directory: '/golem/database/operation/shots/12829/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean'

real	0m0.464s
user	0m0.421s
sys	0m0.039s
=== analysis done === Time: .4647s
Thu Sep 12 17:08:22 CEST 2013
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/SessionPreparation/2013/120913_1426/170620/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
/golem/database/pygolem_lite/modules.py:330: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
correction on plasma position failed Missing file: /golem/database/operation/shots/12829/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12829/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
saving 0.961922883987
plotting time 0.96s
Some mistake during get_data: Missing file: /golem/database/operation/shots/12829/analysis/Radiation/1212Impurities_TO.ON/data//temperature
saving 0.395356893539
plotting time 0.40s
Some mistake during get_data: Missing file: /golem/database/operation/shots/12829/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.597869873047
plotting time 0.60s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 10.01, 'xend': 19.109999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 10.01, 'xend': 19.109999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 10.01, 'xend': 19.109999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 10.01, 'xend': 19.109999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([ 10.01,  19.11]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 10.01, 'xend': 19.109999999999999, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 10.01, 'xend': 19.11, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [{'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.00000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - total'}, 'xstart': 10.01, 'xend': 19.11, 'data': Data([ 0.        ,  0.        ,  0.        , ..., -0.00815723,
       -0.00814699, -0.00813674]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - magnetic'}, 'xstart': 10.01, 'xend': 19.11, 'data': Data([  2.70072853e-11,   1.78461747e-10,  -7.07083885e-11, ...,
        -1.24049370e-01,   3.87680939e-01,   2.29891626e+00]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - plasma'}, 'xstart': 10.01, 'xend': 19.11, 'data': Data([-0.        , -0.        ,  0.        , ...,  0.09981909,
        0.07517214, -2.24642676]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - chamber'}, 'xstart': 10.01, 'xend': 19.11, 'data': Data([ -2.70072853e-11,  -7.13284720e-11,   7.07083885e-11, ...,
        -3.02059135e-02,  -3.62864304e-02,  -6.06262474e-02]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 10.01, 'xend': 19.11, 'data': Data([ 0.22251257,  0.22162416,  0.21967316, ..., -0.39441484,
       -0.38990169, -0.38757364]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([ 10.01,  19.11]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 10.01, 'xend': 19.11, 'data': array([0, 0]), 'ylim': [None, None]}]]
saving 0.206825017929
plotting time 0.21s

real	0m3.340s
user	0m3.169s
sys	0m0.213s
Thu Sep 12 17:08:25 CEST 2013 ============== action: clean =======================
make: *** No rule to make target `clean'.  Stop.
make: Entering directory `/golem/database/operation/tasks/SessionPreparation/2013/120913_1426/170620/analysis/Basics/0612AdvancedAnalysis.ON'
make: *** No rule to make target `clean'.  Stop.
make: Leaving directory `/golem/database/operation/tasks/SessionPreparation/2013/120913_1426/170620/analysis/Basics/0612AdvancedAnalysis.ON'
=== plots === Time: 3.344s
correction on plasma position failed Missing file: /golem/database/operation/shots/12829/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
electron_density failed
electron_density correction failed Missing file: /golem/database/operation/shots/12829/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
saving 0.932584047318
plotting time 0.93s
Some mistake during get_data: Missing file: /golem/database/operation/shots/12829/analysis/Radiation/1212Impurities_TO.ON/data//temperature
saving 0.347676992416
plotting time 0.35s
Some mistake during get_data: Missing file: /golem/database/operation/shots/12829/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
saving 0.556683063507
plotting time 0.56s
===== plotting done ===== 
[[{'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Safety factor edge (Q$_{edge}$)'}, 'xstart': 10.01, 'xend': 19.109999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'Q [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': '(Q$_{center}$) (peaking factor = 2)'}, 'xstart': 10.01, 'xend': 19.109999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], []], [{'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Inverse Safety factor $\\iota_{edge}$'}, 'xstart': 10.01, 'xend': 19.109999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.40000000e-02, ...,
         3.99760000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': ' $\\iota_{center}$ (peaking factor = 2)'}, 'xstart': 10.01, 'xend': 19.109999999999999, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], [], {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': '$\\iota$ [-]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([ 10.01,  19.11]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': 'Q=2'}, 'xstart': 10.01, 'xend': 19.109999999999999, 'data': array([ 0.5,  0.5]), 'ylim': [0, None]}], [{'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'T [eV]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   8.00000000e-03,   2.40000000e-02, ...,
         3.99720000e+01,   3.99840000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Electron temperature'}, 'xstart': 10.01, 'xend': 19.11, 'data': Data([ nan,  nan,  nan, ...,  nan,  nan,  nan]), 'ylim': [0, None]}, [], None], [{'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - total'}, 'xstart': 10.01, 'xend': 19.11, 'data': Data([ 0.        ,  0.        ,  0.        , ..., -0.00815723,
       -0.00784115, -0.00813674]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.00000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - magnetic'}, 'xstart': 10.01, 'xend': 19.11, 'data': Data([  2.70072853e-11,   7.13284720e-11,  -1.41443621e-10, ...,
        -1.24049370e-01,   3.87680939e-01,   2.29891626e+00]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   1.20000000e-02,   2.00000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - plasma'}, 'xstart': 10.01, 'xend': 19.11, 'data': Data([-0.        , -0.        ,  0.        , ...,  0.09981909,
       -0.35923566, -2.24642676]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  4.00000000e-03,   8.00000000e-03,   2.00000000e-02, ...,
         3.99720000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'yerr': None, 'label': 'Ohmic heating - chamber'}, 'xstart': 10.01, 'xend': 19.11, 'data': Data([ -9.94322278e-11,  -1.78461747e-10,   1.41443621e-10, ...,
        -3.19934483e-02,  -3.62864304e-02,  -6.06262474e-02]), 'ylim': [None, None]}, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([  0.00000000e+00,   1.20000000e-02,   2.40000000e-02, ...,
         3.99760000e+01,   3.99880000e+01,   3.99960000e+01]), 'kwargs': {'xerr': None, 'fmt': 'k--', 'yerr': None, 'label': 'Output power (diod)'}, 'xstart': 10.01, 'xend': 19.11, 'data': Data([ 0.22344163,  0.22082606,  0.21942557, ..., -0.39441484,
       -0.38990169, -0.38757364]), 'ylim': [None, None]}, None, {'ygrid': False, 'vlines': [], 'xlim': array([ 10.01,  19.11]), 'yscale': '', 'ylabel': 'P [kW]', 'xgrid': False, 'annotate': [], 'xlabel': 'Time [ms]', 'tvec': array([ 10.01,  19.11]), 'kwargs': {'xerr': None, 'fmt': 'k:', 'yerr': None, 'label': ''}, 'xstart': 10.01, 'xend': 19.11, 'data': array([0, 0]), 'ylim': [None, None]}]]
saving 0.224801063538
plotting time 0.22s

real	0m3.396s
user	0m3.318s
sys	0m0.167s
=== postanalysis === Time: 3.397s