Thu Oct 22 16:06:06 CEST 2015 ============== action: acquisition ======================= real 0m0.001s user 0m0.000s sys 0m0.000s === acquisition done === Time: .0020s Thu Oct 22 16:06:06 CEST 2015 ============== action: analysis ======================= Performing advanced discharge analysis confinent time failed Loading of constant failed: /golem/database/operation/shots/19998/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean error: [Errno 2] No such file or directory: '/golem/database/operation/shots/19998/diagnostics/Microwaves/0712Interferometer.ON/results/electron_density_mean' real 0m0.504s user 0m0.448s sys 0m0.048s === analysis done === Time: .5049s ThuThu Oct 22 16:06:07 CEST 2015 !!! ============== action: postanalysis ======================= LOCAL_PATH /golem/database/operation/tasks/SessionPreparation/221015_1550/160435/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis main.py:165: RuntimeWarning: divide by zero encountered in divide ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:165: RuntimeWarning: invalid value encountered in multiply ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:166: RuntimeWarning: divide by zero encountered in divide ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) main.py:166: RuntimeWarning: invalid value encountered in multiply ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) main.py:169: RuntimeWarning: invalid value encountered in greater ne_corr_nu1[ne_corr_nu1>1.5] = nan main.py:170: RuntimeWarning: invalid value encountered in greater ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan main.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan main.py:165: RuntimeWarning: divide by zero encountered in divide ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:165: RuntimeWarning: invalid value encountered in multiply ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:166: RuntimeWarning: divide by zero encountered in divide ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) main.py:166: RuntimeWarning: invalid value encountered in multiply ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) main.py:169: RuntimeWarning: invalid value encountered in greater ne_corr_nu1[ne_corr_nu1>1.5] = nan main.py:170: RuntimeWarning: invalid value encountered in greater ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan main.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan convert: improper image header `plot_2.png' @ error/png.c/ReadPNGImage/3930. convert: no images defined `plot_2.png' @ error/convert.c/ConvertImageCommand/3210. /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... convert: improper image header `plot_3.png' @ error/png.c/ReadPNGImage/3930. convert: no images defined `plot_3.png' @ error/convert.c/ConvertImageCommand/3210. convert: Expected 8192 bytes; found 7991 bytes `plot_4.png' @ warning/png.c/MagickPNGWarningHandler/1671. convert: Read Exception `plot_4.png' @ error/png.c/MagickPNGErrorHandler/1645. convert: corrupt image `plot_4.png' @ error/png.c/ReadPNGImage/3978. convert: no images defined `plot_4.png' @ error/convert.c/ConvertImageCommand/3210. ======= mean(isnan(corr)) 0.0984731755148 electron_density failed plotting time 1.42s Some mistake during get_data: Missing file: /golem/database/operation/shots/19998/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 1.05s Some mistake during get_data: Missing file: /golem/database/operation/shots/19998/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 0.96s plotting time 0.61s ===== plotting done ===== plotting time 0.53s real 0m7.762s user 0m5.968s sys 0m0.248s Thu Oct 22 16:06:15 CEST 2015 ============== action: clean ======================= make: *** No rule to make target 'clean'. Stop. make: Entering directory '/golem/database/operation/tasks/SessionPreparation/221015_1550/160435/analysis/Basics/0612AdvancedAnalysis.ON' make: *** No rule to make target 'clean'. Stop. make: Leaving directory '/golem/database/operation/tasks/SessionPreparation/221015_1550/160435/analysis/Basics/0612AdvancedAnalysis.ON' === plots === Time: 7,767s ======= mean(isnan(corr)) 0.0984731755148 electron_density failed plotting time 1.38s Some mistake during get_data: Missing file: /golem/database/operation/shots/19998/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.74s Some mistake during get_data: Missing file: /golem/database/operation/shots/19998/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 0.93s plotting time 0.65s ===== plotting done ===== plotting time 0.53s real 0m7.589s user 0m5.928s sys 0m0.264s === postanalysis === Time: 7,591s Thu Oct 22 16:09:48 CEST 2015 !!! ============== action: postanalysis ======================= LOCAL_PATH /golem/database/operation/tasks/SessionPreparation/221015_1550/160435/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis main.py:165: RuntimeWarning: divide by zero encountered in divide ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:165: RuntimeWarning: invalid value encountered in multiply ne_corr_nu1 = r0/a*(pos_part(1-R/r0))**1.5 #peaking factor 1; profile = (1-(r/a)^2) main.py:166: RuntimeWarning: divide by zero encountered in divide ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) main.py:166: RuntimeWarning: invalid value encountered in multiply ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0)) #peaking factor 0.5; profile = sqrt(1-(r/a)^2) main.py:169: RuntimeWarning: invalid value encountered in greater ne_corr_nu1[ne_corr_nu1>1.5] = nan main.py:170: RuntimeWarning: invalid value encountered in greater ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan main.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... ======= mean(isnan(corr)) 0.0984731755148 electron_density failed plotting time 0.81s Some mistake during get_data: Missing file: /golem/database/operation/shots/19998/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.39s Some mistake during get_data: Missing file: /golem/database/operation/shots/19998/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 0.64s plotting time 0.65s ===== plotting done ===== plotting time 0.42s real 0m4.890s user 0m4.296s sys 0m0.220s === postanalysis === Time: 4,891s