Thu Feb 11 16:35:28 CET 2016
============== action: acquisition =======================

real	0m0.025s
user	0m0.000s
sys	0m0.000s
=== acquisition done === Time: .0257s
Thu Feb 11 16:35:28 CET 2016
============== action: analysis =======================
Performing advanced discharge analysis
I 0.00165571
B 0.183045
P 20.6094
n 0.762583
R 0.4
Aspect 0.25
confinent time =  0.921873615544

real	0m0.763s
user	0m0.528s
sys	0m0.060s
=== analysis done === Time: .7636s
Thumain.py:165: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:165: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:166: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:166: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:169: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu1[ne_corr_nu1>1.5] = nan
main.py:170: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
Thu Feb 11 16:35:33 CET 2016
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/Training/2016/110216_1617/163332/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
main.py:165: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:165: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:166: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:166: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:169: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu1[ne_corr_nu1>1.5] = nan
main.py:170: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
main.py:249: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [],
/golem/database/pygolem_lite/modules.py:468: RuntimeWarning: invalid value encountered in multiply
  data *= data_rescale
main.py:250: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] ]
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
main.py:249: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [],
/golem/database/pygolem_lite/modules.py:468: RuntimeWarning: invalid value encountered in multiply
  data *= data_rescale
main.py:250: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] ]
======= mean(isnan(corr))  0.0750759878419
plotting time 1.29s
Some mistake during get_data: Missing file: /golem/database/operation/shots/20797/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 0.70s
Some mistake during get_data: Missing file: /golem/database/operation/shots/20797/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 0.84s
plotting time 1.46s
===== plotting done ===== 
plotting time 0.60s

real	0m8.217s
user	0m6.164s
sys	0m0.404s
=== postanalysis === Time: 8,227s
======= mean(isnan(corr))  0.0750759878419
plotting time 1.79s
Some mistake during get_data: Missing file: /golem/database/operation/shots/20797/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 1.01s
Some mistake during get_data: Missing file: /golem/database/operation/shots/20797/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 1.31s
plotting time 3.31s
===== plotting done ===== 
plotting time 0.46s

real	0m12.205s
user	0m6.504s
sys	0m0.476s
Thu Feb 11 16:35:42 CET 2016 ============== action: clean =======================
make: *** No rule to make target 'clean'.  Stop.
make: Entering directory '/golem/database/operation/tasks/Training/2016/110216_1617/163332/analysis/Basics/0612AdvancedAnalysis.ON'
make: *** No rule to make target 'clean'.  Stop.
make: Leaving directory '/golem/database/operation/tasks/Training/2016/110216_1617/163332/analysis/Basics/0612AdvancedAnalysis.ON'
=== plots === Time: 12,20s
Thu Feb 11 16:39:13 CET 2016
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/Training/2016/110216_1617/163332/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
main.py:165: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:165: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:166: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:166: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:169: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu1[ne_corr_nu1>1.5] = nan
main.py:170: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
main.py:249: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [],
/golem/database/pygolem_lite/modules.py:468: RuntimeWarning: invalid value encountered in multiply
  data *= data_rescale
main.py:250: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] ]
======= mean(isnan(corr))  0.0750759878419
plotting time 0.95s
Some mistake during get_data: Missing file: /golem/database/operation/shots/20797/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 0.40s
Some mistake during get_data: Missing file: /golem/database/operation/shots/20797/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 0.44s
plotting time 0.61s
===== plotting done ===== 
plotting time 0.46s

real	0m4.566s
user	0m4.032s
sys	0m0.156s
=== postanalysis === Time: 4,567s