Wed Feb 17 10:10:18 CET 2016
============== action: acquisition =======================

real	0m0.002s
user	0m0.000s
sys	0m0.000s
=== acquisition done === Time: .0022s
Wed Feb 17 10:10:18 CET 2016
============== action: analysis =======================
Performing advanced discharge analysis
I 0.00116627
B 0.383991
P 15.5899
n 0.138087
R 0.4
Aspect 0.25
confinent time =  0.447478090159

real	0m0.557s
user	0m0.516s
sys	0m0.032s
=== analysis done === Time: .5575s
Wed Feb 17 10:10:19 CET 2016
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/SessionPreparation/170216_0818/100832/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
Wedmain.py:165: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:165: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:166: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:166: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:169: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu1[ne_corr_nu1>1.5] = nan
main.py:170: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan
main.py:165: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:165: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:166: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:166: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:169: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu1[ne_corr_nu1>1.5] = nan
main.py:170: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
main.py:249: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [],
main.py:250: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] ]
main.py:249: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [],
main.py:250: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] ]
======= mean(isnan(corr))  0.0230136986301
plotting time 1.03s
Some mistake during get_data: Missing file: /golem/database/operation/shots/20835/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 0.57s
Some mistake during get_data: Missing file: /golem/database/operation/shots/20835/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 1.13s
plotting time 0.95s
===== plotting done ===== 
plotting time 0.64s

real	0m6.872s
user	0m6.160s
sys	0m0.308s
Wed Feb 17 10:10:25 CET 2016 ============== action: clean =======================
make: *** No rule to make target 'clean'.  Stop.
make: Entering directory '/golem/database/operation/tasks/SessionPreparation/170216_0818/100832/analysis/Basics/0612AdvancedAnalysis.ON'
make: *** No rule to make target 'clean'.  Stop.
make: Leaving directory '/golem/database/operation/tasks/SessionPreparation/170216_0818/100832/analysis/Basics/0612AdvancedAnalysis.ON'
=== plots === Time: 6,876s
======= mean(isnan(corr))  0.0230136986301
plotting time 1.09s
Some mistake during get_data: Missing file: /golem/database/operation/shots/20835/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 0.86s
Some mistake during get_data: Missing file: /golem/database/operation/shots/20835/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 0.96s
plotting time 0.71s
===== plotting done ===== 
plotting time 0.76s

real	0m7.030s
user	0m6.184s
sys	0m0.264s
=== postanalysis === Time: 7,031s
Wed Feb 17 10:13:58 CET 2016
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/SessionPreparation/170216_0818/100832/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
main.py:165: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:165: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:166: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:166: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:169: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu1[ne_corr_nu1>1.5] = nan
main.py:170: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
main.py:249: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [],
main.py:250: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] ]
======= mean(isnan(corr))  0.0230136986301
plotting time 0.98s
Some mistake during get_data: Missing file: /golem/database/operation/shots/20835/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 0.53s
Some mistake during get_data: Missing file: /golem/database/operation/shots/20835/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 0.55s
plotting time 0.62s
===== plotting done ===== 
plotting time 0.48s

real	0m5.196s
user	0m4.400s
sys	0m0.236s
=== postanalysis === Time: 5,198s