Thu Dec 15 19:51:02 CET 2016 ============== action: acquisition ======================= real 0m0.001s user 0m0.000s sys 0m0.000s === acquisition done === Time: .0013s Thu Dec 15 19:51:02 CET 2016 ============== action: analysis ======================= Performing advanced discharge analysis I 0.00181736 B 0.20062 P 14.0073 n 0.0496696 R 0.4 Aspect 0.25 confinent time = 0.434158741515 real 0m0.576s user 0m0.528s sys 0m0.040s === analysis done === Time: .5764s Thu Dec 15 19:51:02 CET 2016 !!! ============== action: postanalysis ======================= LOCAL_PATH /golem/database/operation/tasks/Experiments/EdgePlasmaPhysics/MachProbe/1216IntroHS/151216_1922/194937/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis Thumain.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan main.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan Bus error /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... Bus error convert: Ignoring bad adaptive filter type `plot_4.png' @ warning/png.c/MagickPNGWarningHandler/1671. convert: incorrect data check `plot_4.png' @ error/png.c/MagickPNGErrorHandler/1645. convert: corrupt image `plot_4.png' @ error/png.c/ReadPNGImage/3978. convert: no images defined `plot_4.png' @ error/convert.c/ConvertImageCommand/3210. correction on plasma position failed Missing file: /golem/database/operation/shots/22882/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius !!!! electron_density correction failed !!! Missing file: /golem/database/operation/shots/22882/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position plotting time 1.14s Some mistake during get_data: Missing file: /golem/database/operation/shots/22882/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.33s Some mistake during get_data: Missing file: /golem/database/operation/shots/22882/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 0.52s plotting time 0.55s ===== plotting done ===== plotting time 0.45s real 0m4.708s user 0m4.296s sys 0m0.324s === postanalysis === Time: 4,710s Thu Dec 15 19:51:07 CET 2016 !!! ============== action: postanalysis ======================= LOCAL_PATH /golem/database/operation/tasks/Experiments/EdgePlasmaPhysics/MachProbe/1216IntroHS/151216_1922/194937/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis correction on plasma position failed Missing file: /golem/database/operation/shots/22882/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius !!!! electron_density correction failed !!! Missing file: /golem/database/operation/shots/22882/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position plotting time 0.95s Some mistake during get_data: Missing file: /golem/database/operation/shots/22882/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.39s Some mistake during get_data: Missing file: /golem/database/operation/shots/22882/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 0.55s plotting time 0.45s ===== plotting done ===== plotting time 0.48s real 0m4.448s user 0m4.088s sys 0m0.232s Thu Dec 15 19:51:07 CET 2016 ============== action: clean ======================= make: *** No rule to make target 'clean'. Stop. make: Entering directory '/golem/database/operation/tasks/Experiments/EdgePlasmaPhysics/MachProbe/1216IntroHS/151216_1922/194937/analysis/Basics/0612AdvancedAnalysis.ON' make: *** No rule to make target 'clean'. Stop. make: Leaving directory '/golem/database/operation/tasks/Experiments/EdgePlasmaPhysics/MachProbe/1216IntroHS/151216_1922/194937/analysis/Basics/0612AdvancedAnalysis.ON' === plots === Time: 4,451s main.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... correction on plasma position failed Missing file: /golem/database/operation/shots/22882/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius !!!! electron_density correction failed !!! Missing file: /golem/database/operation/shots/22882/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position plotting time 0.74s Some mistake during get_data: Missing file: /golem/database/operation/shots/22882/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.34s Some mistake during get_data: Missing file: /golem/database/operation/shots/22882/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 0.51s plotting time 0.64s ===== plotting done ===== plotting time 0.45s real 0m3.959s user 0m3.520s sys 0m0.168s === postanalysis === Time: 3,960s