Thu Mar 2 21:08:45 CET 2017 ============== action: acquisition ======================= real 0m0.024s user 0m0.000s sys 0m0.000s === acquisition done === Time: .0242s Thu Mar 2 21:08:45 CET 2017 ============== action: analysis ======================= Performing advanced discharge analysis I 0.0033322 B 0.404163 P 13.3337 n 0.0217721 R 0.4 Aspect 0.25 confinent time = 0.625239251804 real 0m0.660s user 0m0.568s sys 0m0.084s === analysis done === Time: .6604s Thu Mar 2 21:08:46 CET 2017 !!! ============== action: postanalysis ======================= LOCAL_PATH /golem/database/operation/tasks/Experiments/EdgePlasmaPhysics/BallPenProbeVersusRakeProbe/020317_1906/210659/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis Thumain.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan main.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan convert: Expected 8192 bytes; found 7991 bytes `plot_1.png' @ warning/png.c/MagickPNGWarningHandler/1671. convert: Read Exception `plot_1.png' @ error/png.c/MagickPNGErrorHandler/1645. convert: corrupt image `plot_1.png' @ error/png.c/ReadPNGImage/3978. convert: no images defined `plot_1.png' @ error/convert.c/ConvertImageCommand/3210. /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... Bus error correction on plasma position failed Missing file: /golem/database/operation/shots/23451/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius !!!! electron_density correction failed !!! Missing file: /golem/database/operation/shots/23451/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position plotting time 1.56s Some mistake during get_data: Missing file: /golem/database/operation/shots/23451/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.71s Some mistake during get_data: Missing file: /golem/database/operation/shots/23451/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 1.34s plotting time 0.96s ===== plotting done ===== plotting time 0.96s real 0m8.097s user 0m6.944s sys 0m0.308s Thu Mar 2 21:08:54 CET 2017 ============== action: clean ======================= make: *** No rule to make target 'clean'. Stop. make: Entering directory '/golem/database/operation/tasks/Experiments/EdgePlasmaPhysics/BallPenProbeVersusRakeProbe/020317_1906/210659/analysis/Basics/0612AdvancedAnalysis.ON' make: *** No rule to make target 'clean'. Stop. make: Leaving directory '/golem/database/operation/tasks/Experiments/EdgePlasmaPhysics/BallPenProbeVersusRakeProbe/020317_1906/210659/analysis/Basics/0612AdvancedAnalysis.ON' === plots === Time: 8,101s correction on plasma position failed Missing file: /golem/database/operation/shots/23451/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius !!!! electron_density correction failed !!! Missing file: /golem/database/operation/shots/23451/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position plotting time 1.57s Some mistake during get_data: Missing file: /golem/database/operation/shots/23451/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.53s Some mistake during get_data: Missing file: /golem/database/operation/shots/23451/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 1.39s plotting time 1.04s ===== plotting done ===== plotting time 1.06s real 0m8.393s user 0m6.920s sys 0m0.324s === postanalysis === Time: 8,394s Thu Mar 2 21:09:07 CET 2017 !!! ============== action: postanalysis ======================= LOCAL_PATH /golem/database/operation/tasks/Experiments/EdgePlasmaPhysics/BallPenProbeVersusRakeProbe/020317_1906/210659/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis main.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... correction on plasma position failed Missing file: /golem/database/operation/shots/23451/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius !!!! electron_density correction failed !!! Missing file: /golem/database/operation/shots/23451/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position plotting time 1.11s Some mistake during get_data: Missing file: /golem/database/operation/shots/23451/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.40s Some mistake during get_data: Missing file: /golem/database/operation/shots/23451/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 0.71s plotting time 0.63s ===== plotting done ===== plotting time 0.82s real 0m5.144s user 0m4.400s sys 0m0.204s === postanalysis === Time: 5,146s