Mon Jul 17 11:31:18 CEST 2017 ============== action: acquisition ======================= real 0m0.001s user 0m0.000s sys 0m0.000s === acquisition done === Time: .0020s Mon Jul 17 11:31:18 CEST 2017 ============== action: analysis ======================= Performing advanced discharge analysis I 0.0012877 B 0.193276 P 16.6079 n 0.974384 R 0.4 Aspect 0.25 confinent time = 0.944096225353 real 0m0.873s user 0m0.800s sys 0m0.068s === analysis done === Time: .8737s Mon Jul 17 11:31:18 CEST 2017 !!! ============== action: postanalysis ======================= LOCAL_PATH /golem/database/operation/tasks/Training/2017/170717_1110/112954/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis Monmain.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan main.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... Bus error correction on plasma position failed Missing file: /golem/database/operation/shots/24429/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius !!!! electron_density correction failed !!! Missing file: /golem/database/operation/shots/24429/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position plotting time 2.98s Some mistake during get_data: Missing file: /golem/database/operation/shots/24429/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 1.18s Some mistake during get_data: Missing file: /golem/database/operation/shots/24429/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 1.45s plotting time 2.67s ===== plotting done ===== plotting time 2.04s real 0m12.823s user 0m5.168s sys 0m0.352s Mon Jul 17 11:31:31 CEST 2017 ============== action: clean ======================= make: *** No rule to make target 'clean'. Stop. make: Entering directory '/golem/database/operation/tasks/Training/2017/170717_1110/112954/analysis/Basics/0612AdvancedAnalysis.ON' make: *** No rule to make target 'clean'. Stop. make: Leaving directory '/golem/database/operation/tasks/Training/2017/170717_1110/112954/analysis/Basics/0612AdvancedAnalysis.ON' ./run_scripts.sh: line 386: [: -eq: unary operator expected === plots === Time: 12,82s correction on plasma position failed Missing file: /golem/database/operation/shots/24429/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius !!!! electron_density correction failed !!! Missing file: /golem/database/operation/shots/24429/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position plotting time 3.15s Some mistake during get_data: Missing file: /golem/database/operation/shots/24429/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.76s Some mistake during get_data: Missing file: /golem/database/operation/shots/24429/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 1.62s plotting time 2.69s ===== plotting done ===== plotting time 2.35s real 0m13.044s user 0m5.480s sys 0m0.312s === postanalysis === Time: 13,04s Mon Jul 17 11:31:36 CEST 2017 !!! ============== action: postanalysis ======================= LOCAL_PATH /golem/database/operation/tasks/Training/2017/170717_1110/112954/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis main.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... correction on plasma position failed Missing file: /golem/database/operation/shots/24429/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius !!!! electron_density correction failed !!! Missing file: /golem/database/operation/shots/24429/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position plotting time 0.80s Some mistake during get_data: Missing file: /golem/database/operation/shots/24429/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.35s Some mistake during get_data: Missing file: /golem/database/operation/shots/24429/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 0.53s plotting time 0.50s ===== plotting done ===== plotting time 0.52s real 0m4.019s user 0m3.652s sys 0m0.208s === postanalysis === Time: 4,020s