Mon Jan 15 14:52:28 CET 2018
============== action: acquisition =======================

real	0m0.001s
user	0m0.000s
sys	0m0.000s
=== acquisition done === Time: .0018s
Mon Jan 15 14:52:28 CET 2018
============== action: analysis =======================
Performing advanced discharge analysis
I 0.00571806
B 0.323653
P 30.8658
n 0.0552106
R 0.4
Aspect 0.25
confinent time =  0.820054390174

real	0m0.878s
user	0m0.776s
sys	0m0.092s
=== analysis done === Time: .8789s
MonMon Jan 15 14:52:30 CET 2018
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/TrainingCourses/Universities/TU_Kobenhavn.dk/18/150118_1255/145040/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
convert: Expected 8192 bytes; found 7991 bytes `plot_1.png' @ warning/png.c/MagickPNGWarningHandler/1669.
convert: Read Exception `plot_1.png' @ error/png.c/MagickPNGErrorHandler/1643.
convert: corrupt image `plot_1.png' @ error/png.c/ReadPNGImage/3973.
convert: no images defined `plot_1.png' @ error/convert.c/ConvertImageCommand/3210.
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
correction on plasma position failed Missing file: /golem/database/operation/shots/25828/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
 !!!!  electron_density correction failed !!!  Missing file: /golem/database/operation/shots/25828/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
plotting time 2.11s
Some mistake during get_data: Missing file: /golem/database/operation/shots/25828/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 0.83s
Some mistake during get_data: Missing file: /golem/database/operation/shots/25828/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 1.46s
plotting time 1.16s
===== plotting done ===== 
plotting time 0.78s

real	0m8.830s
user	0m6.600s
sys	0m0.400s
Mon Jan 15 14:52:38 CET 2018 ============== action: clean =======================
make: *** No rule to make target 'clean'.  Stop.
make: Entering directory '/golem/database/operation/tasks/TrainingCourses/Universities/TU_Kobenhavn.dk/18/150118_1255/145040/analysis/Basics/0612AdvancedAnalysis.ON'
make: *** No rule to make target 'clean'.  Stop.
make: Leaving directory '/golem/database/operation/tasks/TrainingCourses/Universities/TU_Kobenhavn.dk/18/150118_1255/145040/analysis/Basics/0612AdvancedAnalysis.ON'
=== plots === Time: 8,840s
correction on plasma position failed Missing file: /golem/database/operation/shots/25828/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
 !!!!  electron_density correction failed !!!  Missing file: /golem/database/operation/shots/25828/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
plotting time 1.73s
Some mistake during get_data: Missing file: /golem/database/operation/shots/25828/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 0.68s
Some mistake during get_data: Missing file: /golem/database/operation/shots/25828/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 1.28s
plotting time 1.47s
===== plotting done ===== 
plotting time 0.96s

real	0m8.813s
user	0m6.688s
sys	0m0.360s
=== postanalysis === Time: 8,846s
Mon Jan 15 14:53:42 CET 2018
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/TrainingCourses/Universities/TU_Kobenhavn.dk/18/150118_1255/145040/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
correction on plasma position failed Missing file: /golem/database/operation/shots/25828/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius
 !!!!  electron_density correction failed !!!  Missing file: /golem/database/operation/shots/25828/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position
plotting time 0.94s
Some mistake during get_data: Missing file: /golem/database/operation/shots/25828/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 0.43s
Some mistake during get_data: Missing file: /golem/database/operation/shots/25828/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 0.64s
plotting time 0.63s
===== plotting done ===== 
plotting time 0.52s

real	0m4.651s
user	0m4.048s
sys	0m0.216s
=== postanalysis === Time: 4,653s