Thu Jun 14 16:49:20 CEST 2018 ============== action: acquisition ======================= real 0m0.030s user 0m0.000s sys 0m0.000s === acquisition done === Time: .0307s Thu Jun 14 16:49:20 CEST 2018 ============== action: analysis ======================= Performing advanced discharge analysis I 0.00149306 B 0.230969 P 11.2372 n 0.260238 R 0.4 Aspect 0.25 confinent time = 0.847954415303 real 0m0.619s user 0m0.540s sys 0m0.068s === analysis done === Time: .6194s Thu Jun 14 16:49:20 CEST 2018 !!! ============== action: postanalysis ======================= LOCAL_PATH /golem/database/operation/tasks/Training/2018/140618_1528/164411/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis Thumain.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan main.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan convert: Ignoring bad adaptive filter type `plot_1.png' @ warning/png.c/MagickPNGWarningHandler/1669. convert: IDAT: CRC error `plot_1.png' @ error/png.c/MagickPNGErrorHandler/1643. convert: corrupt image `plot_1.png' @ error/png.c/ReadPNGImage/3987. convert: no images defined `plot_1.png' @ error/convert.c/ConvertImageCommand/3210. convert: Expected 8192 bytes; found 8102 bytes `plot_2.png' @ warning/png.c/MagickPNGWarningHandler/1669. convert: Read Exception `plot_2.png' @ error/png.c/MagickPNGErrorHandler/1643. convert: corrupt image `plot_2.png' @ error/png.c/ReadPNGImage/3987. convert: no images defined `plot_2.png' @ error/convert.c/ConvertImageCommand/3210. /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... convert: improper image header `plot_4.png' @ error/png.c/ReadPNGImage/3941. convert: no images defined `plot_4.png' @ error/convert.c/ConvertImageCommand/3210. correction on plasma position failed Missing file: /golem/database/operation/shots/27479/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius !!!! electron_density correction failed !!! Missing file: /golem/database/operation/shots/27479/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position plotting time 1.06s Some mistake during get_data: Missing file: /golem/database/operation/shots/27479/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.58s Some mistake during get_data: Missing file: /golem/database/operation/shots/27479/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 0.87s plotting time 0.49s ===== plotting done ===== plotting time 0.53s real 0m5.250s user 0m4.808s sys 0m0.256s Thu Jun 14 16:49:26 CEST 2018 ============== action: clean ======================= make: *** No rule to make target 'clean'. Stop. make: Entering directory '/golem/database/operation/tasks/Training/2018/140618_1528/164411/analysis/Basics/0612AdvancedAnalysis.ON' make: *** No rule to make target 'clean'. Stop. make: Leaving directory '/golem/database/operation/tasks/Training/2018/140618_1528/164411/analysis/Basics/0612AdvancedAnalysis.ON' === plots === Time: 5,254s correction on plasma position failed Missing file: /golem/database/operation/shots/27479/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius !!!! electron_density correction failed !!! Missing file: /golem/database/operation/shots/27479/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position plotting time 1.08s Some mistake during get_data: Missing file: /golem/database/operation/shots/27479/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.47s Some mistake during get_data: Missing file: /golem/database/operation/shots/27479/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 0.78s plotting time 0.97s ===== plotting done ===== plotting time 0.64s real 0m6.119s user 0m4.928s sys 0m0.352s === postanalysis === Time: 6,120s Thu Jun 14 16:50:31 CEST 2018 !!! ============== action: postanalysis ======================= LOCAL_PATH /golem/database/operation/tasks/Training/2018/140618_1528/164411/analysis/Basics/0612AdvancedAnalysis.ON Performing advanced discharge postanalysis main.py:187: RuntimeWarning: invalid value encountered in greater safety_factor[safety_factor > 2* nanmedian(safety_factor[ind_plasma])] = nan /golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide if dy/amax(abs(array(yrange))) < 1e-6: # constant line ... correction on plasma position failed Missing file: /golem/database/operation/shots/27479/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/plasma_radius !!!! electron_density correction failed !!! Missing file: /golem/database/operation/shots/27479/diagnostics/Magnetic/0612PlasmaPosition_TO.ON/results/R_position plotting time 0.88s Some mistake during get_data: Missing file: /golem/database/operation/shots/27479/analysis/Radiation/1212Impurities_TO.ON/data//temperature plotting time 0.44s Some mistake during get_data: Missing file: /golem/database/operation/shots/27479/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower plotting time 0.75s plotting time 0.74s ===== plotting done ===== plotting time 0.62s real 0m4.929s user 0m3.852s sys 0m0.412s === postanalysis === Time: 4,931s