Tue May 14 16:11:18 CEST 2019
============== action: acquisition =======================

real	0m0.001s
user	0m0.000s
sys	0m0.000s
=== acquisition done === Time: .0017s
Tue May 14 16:11:18 CEST 2019
============== action: analysis =======================
Performing advanced discharge analysis
I 0.00143036
B 0.22775
P 19.4466
n 0.0900586
R 0.4
Aspect 0.25
confinent time =  0.360442365669

real	0m0.648s
user	0m0.564s
sys	0m0.076s
=== analysis done === Time: .6489s
Tue May 14 16:11:19 CEST 2019
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/SessionPreparation/2019/140519_1435/160846/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
Tuemain.py:165: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:165: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:166: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:166: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:169: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu1[ne_corr_nu1>1.5] = nan
main.py:170: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan
main.py:165: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:165: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:166: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:166: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:169: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu1[ne_corr_nu1>1.5] = nan
main.py:170: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
convert: Expected 8192 bytes; found 7991 bytes `plot_3.png' @ warning/png.c/MagickPNGWarningHandler/1669.
convert: Read Exception `plot_3.png' @ error/png.c/MagickPNGErrorHandler/1643.
convert: corrupt image `plot_3.png' @ error/png.c/ReadPNGImage/3987.
convert: no images defined `plot_3.png' @ error/convert.c/ConvertImageCommand/3210.
main.py:249: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [],
main.py:249: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [],
main.py:250: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] ]
main.py:250: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] ]
convert: Expected 8192 bytes; found 7991 bytes `plot_4.png' @ warning/png.c/MagickPNGWarningHandler/1669.
convert: Read Exception `plot_4.png' @ error/png.c/MagickPNGErrorHandler/1643.
convert: corrupt image `plot_4.png' @ error/png.c/ReadPNGImage/3987.
convert: no images defined `plot_4.png' @ error/convert.c/ConvertImageCommand/3210.
======= mean(isnan(corr))  0.226469482391
plotting time 1.15s
Some mistake during get_data: Missing file: /golem/database/operation/shots/30576/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 0.72s
Some mistake during get_data: Missing file: /golem/database/operation/shots/30576/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 0.94s
plotting time 1.57s
===== plotting done ===== 
plotting time 0.50s

real	0m7.868s
user	0m7.320s
sys	0m0.344s
Tue May 14 16:11:26 CEST 2019 ============== action: clean =======================
make: *** No rule to make target 'clean'.  Stop.
make: Entering directory '/golem/database/operation/tasks/SessionPreparation/2019/140519_1435/160846/analysis/Basics/0612AdvancedAnalysis.ON'
make: *** No rule to make target 'clean'.  Stop.
make: Leaving directory '/golem/database/operation/tasks/SessionPreparation/2019/140519_1435/160846/analysis/Basics/0612AdvancedAnalysis.ON'
=== plots === Time: 7,873s
======= mean(isnan(corr))  0.226469482391
plotting time 1.18s
Some mistake during get_data: Missing file: /golem/database/operation/shots/30576/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 0.81s
Some mistake during get_data: Missing file: /golem/database/operation/shots/30576/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 0.84s
plotting time 1.59s
===== plotting done ===== 
plotting time 0.57s

real	0m8.071s
user	0m7.392s
sys	0m0.376s
=== postanalysis === Time: 8,072s
Tue May 14 16:11:39 CEST 2019
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/SessionPreparation/2019/140519_1435/160846/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
main.py:165: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:165: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:166: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:166: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:169: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu1[ne_corr_nu1>1.5] = nan
main.py:170: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
main.py:249: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [],
main.py:250: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] ]
======= mean(isnan(corr))  0.226469482391
plotting time 1.05s
plotting time 0.53s
plotting time 0.70s
plotting time 1.03s
===== plotting done ===== 
plotting time 0.61s

real	0m6.465s
user	0m5.600s
sys	0m0.380s
=== postanalysis === Time: 6,467s