Tue May 14 16:17:39 CEST 2019
============== action: acquisition =======================

real	0m0.001s
user	0m0.000s
sys	0m0.000s
=== acquisition done === Time: .0015s
Tue May 14 16:17:39 CEST 2019
============== action: analysis =======================
Performing advanced discharge analysis
I 0.0021901
B 0.241597
P 24.6586
n 0.0737921
R 0.4
Aspect 0.25
confinent time =  0.422786141243

real	0m0.635s
user	0m0.568s
sys	0m0.060s
=== analysis done === Time: .6362s
Tue May 14 16:17:40 CEST 2019
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/SessionPreparation/2019/140519_1435/161506/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
Tuemain.py:165: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:165: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:166: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:166: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:169: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu1[ne_corr_nu1>1.5] = nan
main.py:170: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
main.py:165: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:165: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:166: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:166: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:169: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu1[ne_corr_nu1>1.5] = nan
main.py:170: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
main.py:249: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [],
main.py:250: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] ]
main.py:249: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [],
main.py:250: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] ]
======= mean(isnan(corr))  0.0124728229775
plotting time 1.14s
Some mistake during get_data: Missing file: /golem/database/operation/shots/30578/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 0.64s
Some mistake during get_data: Missing file: /golem/database/operation/shots/30578/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 0.91s
plotting time 1.41s
===== plotting done ===== 
plotting time 0.55s

real	0m7.671s
user	0m7.096s
sys	0m0.376s
=== postanalysis === Time: 7,672s
======= mean(isnan(corr))  0.0124728229775
plotting time 1.28s
Some mistake during get_data: Missing file: /golem/database/operation/shots/30578/analysis/Radiation/1212Impurities_TO.ON/data//temperature
plotting time 0.59s
Some mistake during get_data: Missing file: /golem/database/operation/shots/30578/analysis/Radiation/1212Impurities_TO.ON/data//TotalPower
plotting time 0.83s
plotting time 1.40s
===== plotting done ===== 
plotting time 0.55s

real	0m7.790s
user	0m7.132s
sys	0m0.428s
Tue May 14 16:17:48 CEST 2019 ============== action: clean =======================
make: *** No rule to make target 'clean'.  Stop.
make: Entering directory '/golem/database/operation/tasks/SessionPreparation/2019/140519_1435/161506/analysis/Basics/0612AdvancedAnalysis.ON'
make: *** No rule to make target 'clean'.  Stop.
make: Leaving directory '/golem/database/operation/tasks/SessionPreparation/2019/140519_1435/161506/analysis/Basics/0612AdvancedAnalysis.ON'
=== plots === Time: 7,794s
Tue May 14 16:18:00 CEST 2019
!!! ============== action: postanalysis =======================
LOCAL_PATH /golem/database/operation/tasks/SessionPreparation/2019/140519_1435/161506/analysis/Basics/0612AdvancedAnalysis.ON
Performing advanced discharge postanalysis
main.py:165: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:165: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu1   = r0/a*(pos_part(1-R/r0))**1.5  #peaking factor 1; profile = (1-(r/a)^2)
main.py:166: RuntimeWarning: divide by zero encountered in divide
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:166: RuntimeWarning: invalid value encountered in multiply
  ne_corr_nu0_5 = r0/a*(pos_part(1-R/r0))  #peaking factor 0.5; profile = sqrt(1-(r/a)^2)
main.py:169: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu1[ne_corr_nu1>1.5] = nan
main.py:170: RuntimeWarning: invalid value encountered in greater
  ne_corr_nu0_5[ne_corr_nu0_5>1.5] = nan
main.py:187: RuntimeWarning: invalid value encountered in greater
  safety_factor[safety_factor >  2* nanmedian(safety_factor[ind_plasma])] = nan
/golem/database/pygolem_lite/modules.py:342: RuntimeWarning: invalid value encountered in divide
  if dy/amax(abs(array(yrange))) < 1e-6:   # constant line ...
main.py:249: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 1$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]' ,data_rescale= 1e-19/ne_corr_nu1, fmt='k--', **params) if 'ne_corr_nu1' in locals() else [],
main.py:250: RuntimeWarning: divide by zero encountered in divide
  get_data('electron_density', '$n_e$ - position corrected, $\\nu = 0.5$', 'n$_{e}$ [10$^{19}\cdot$m$^{-3}$]', data_rescale= 1e-19/ne_corr_nu0_5, fmt='k:', **params) if 'ne_corr_nu0_5' in locals() else [] ]
======= mean(isnan(corr))  0.0124728229775
plotting time 1.09s
plotting time 0.50s
plotting time 0.74s
plotting time 1.14s
===== plotting done ===== 
plotting time 0.52s

real	0m6.622s
user	0m5.804s
sys	0m0.336s
=== postanalysis === Time: 6,623s