BasePath=../..;source $BasePath/Commons.sh



DAS="Oscilloscopes/TektrMSO58-a/ScintillationProbesHiRes"


DeviceList="PowerSupplies/NIMcrate/HXRdiagnostics $DAS"


HXR_probes="CeBr_a YAP_a NaITl_a ZnSAg_a LYSO"
#(x,y,z, theta, phi, HV_PS@NIMcrate, HVchannel@NIMcrate, Voltage)
S_CeBr_a=(380 130 72 180 0 A 0 -700)
S_YAP_a=(380 130 72 180 0 A 1 -800)
S_NaITl_a=(380 130 72 180 0 A 2 -700)
S_ZnSAg_a=(380 130 72 180 0 A 3 -700)


LastChannelToAcq=7

diags=('U_Loop-b' 'YAP' 'CeBr-a' 'CeBr-b' 'NaITl-a' 'LYSO-1' 'LYSO-2' 'Trigger')

# CreateTable @Commons (Call from here ...)

function SetUpHV@NIMchannel()
{
local Voltage=$1
local Channel=$2

    LogIt "HV@NIM setup $Voltage @ $Channel"
    #ssh bn "cd /golem/Dirigent/Devices/PowerSupplies/NIMcrate/HXRdiagnostics/;source NIMcrate.sh;SetupHV@channel $Voltage $Channel"
    Call $SHM0/Devices/PowerSupplies/NIMcrate SetupHV@channel $Voltage $Channel
}

SetUpHVs@NIM()
{
    for i in `seq 1 4`;do
        if [[ $(<Parameters/u_nim_a$i) > 10 ]]; then SetUpHV@NIMchannel $(<Parameters/u_nim_a$i) $((i-1));fi
    done
}


function GetReadyTheDischarge ()
{
  GeneralTableUpdateAtDischargeBeginning $family.$diag_id #@Commons.sh
  SetUpHVs@NIM
  
  
}


function PostDischargeAnalysis()
{
  
   sleep 4
 #   GeneralDAScommunication $DAS RawDataAcquiring
    if [[ ! -d DAS_raw_data_dir ]]; then ln -s $BasePath/Devices/`dirname $DAS` DAS_raw_data_dir; fi
    #ln -s ../../../Devices/$DAS/.. DAS_raw_data_dir

    for i in `seq 1 $LastChannelToAcq` ; do
        cp DAS_raw_data_dir/ch$i.csv ${diags[$i-1]}.csv
    done    

#    Analysis
    
    GenerateDiagWWWs $instrument $setup $DAS
    #GenerateDiagWWWs $diag_id $setup_id $DAS # @Commons.sh
}

function NoAnalysis()
{
    cp $SW/Management/imgs/Commons/WithoutAnalysis.png icon-fig.png
    convert -resize $icon_size icon-fig.png graph.png
}


function Analysis()
{

    local nb_id="23_ScintillationProbes_MT"

    #export SHOT_NO=`cat ../../shot_no` #linux only
    sed -i "s/shot_no=0/shot_no\ =\ `cat $SHMS/shot_no`/g" $nb_id.ipynb
    IfNoPlasmaThenReturn
    
    # execute in cutom conda enviroment
    conda run --name tunklScintHiRes jupyter-nbconvert --ExecutePreprocessor.timeout=300 \
                      --to html \
                      --execute $nb_id.ipynb \
                      --output analysis.html \
                         > >(tee -a jup-nb_stdout.log) \
                         2> >(tee -a jup-nb_stderr.log >&2)

    if [[ -f icon-fig.png ]]; then
        convert -resize $icon_size icon-fig.png graph.png
        convert -resize $icon_size icon-fig.png analysis.jpg
    fi



}